NDB ID: PD0315


Title:CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
Molecular Description:SeqA protein/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsB,E:(DC) (DA) (DC) (DC) (DG) (DA) (DT) (DC) (DG) (DA) (DC) (DT)
ChainsC,F:(DA) (DG) (DT) (DC) (DG) (6MA) (DT) (DC) (DG) (DG) (DT) (DG)
Protein Sequence:
ChainsA,D: Click here for sequence.
Primary Citation:Guarne, A., Zhao, Q., Guirlando, R., Yang, W.
Insights into negative modulation of E. coli replication initiation from the structure of SeqA-hemimethylated DNA complex
NAT.STRUCT.BIOL. , 9, pp. 839 - 843, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 42
Cell Constants:
a = 106.493b = 106.493c = 49.078(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 24.8 for 16158 reflections in the resolution range 23.91 to 2.65 Ångstroms with I > 0.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1LRR

PubMed: 12379844




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