NDB ID: PD0327


Title:ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASE
Molecular Description:Modification methylase HhaI/DNA Complex
Structural Features:B DOUBLE HELIX, FLIPPED OUT BASE
Nucleic Acid Sequence:
ChainC:(DC) (DC) (DA) (DT) (DG) (DC) (DG) (DC) (DT) (DG) (DA) (DC)
ChainD:(DG) (DT) (DC) (DA) (DG) Z (DG) (DC) (DA) (DT) (DG) (DG)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Zhou, L., Cheng, X., Connolly, B.A., Dickman, M.J., Hurd, P.J., Hornby, D.P.
ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASES
J.MOL.BIOL. , 321, pp. 591 - 599, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 96.19b = 96.19c = 315.75(Ångstroms)
= 90.0 = 90.0 = 120.0(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 17.7 for 19591 reflections in the resolution range 39.7 to 2.50 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1M0E

PubMed: 12206775




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