NDB ID: PD0329


Title:LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Molecular Description:NUCLEOSOME CORE PARTICLE
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsI, J:Click here for sequence.
Protein Sequence:
ChainsA, E: Click here for sequence.
ChainsB, F: Click here for sequence.
ChainsC, G: Click here for sequence.
ChainsD, H: Click here for sequence.
Primary Citation:Suto, R.K., Edayathumangalam, R.S., White, C.L., Melander, C., Gottesfeld, J.M., Dervan, P.B., Luger, K.
Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands
J.Mol.Biol. , 326, pp. 371 - 380, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 107.045b = 109.662c = 183.018(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Refinement:The structure was refined using the CNS 1.0 program. The R value is 21.39 for 93443 reflections in the resolution range 80 to 2.3 Ångstroms with I > 2.0 sigma(I).

Biological Unit 1
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Asymmetric Unit
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1M19

PubMed: 12559907




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