NDB ID: PD0358


Title:Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAINING ABASIC LESION
Molecular Description:DNA polymerase IV (E.C.2.7.7.7)/DNA
Structural Features:B DOUBLE HELIX, BULGES, FLIPPED-OUT BASES, OVERHANGING BASES, BASE TRIPLET
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainC:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Ling, H., Boudsocq, F., Woodgate, R., Yang, W.
A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 75.546b = 88.458c = 92.389(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 20.4 for 29643 reflections in the resolution range 29.4 to 2.2 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1N48




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey