NDB ID: PD0370


Title:HUMAN TOPOISOMERASE I ARA-C COMPLEX
Molecular Description:DNA topoisomerase I/DNA Complex
Nucleic Acid Sequence:
ChainB:(DA) (DA) (DA) (DA) (DA) (DG) (DA) (DC) (DU) (UBB)
ChainC:(GNG) (DG) (DA) (DA) (DA) (DA) (DA) (DU) (DU) (DU) (DU) (DT)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Chrencik, J.E., Burgin, A.B., Pommier, Y., Stewart, L., Redinbo, M.R.
Structural Impact of the Leukemia Drug 1-beta-D-Arabinofuranosylcytosine (Ara-C) on the Covalent Human Topoisomerase I-DNA Complex
J.Biol.Chem. , 278, pp. 12461 - 12466, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 32
Cell Constants:
a = 72.97b = 72.97c = 186.29(Ångstroms)
= 90. = 90. = 120.(degrees)
Refinement:The structure was refined using the CNS program. The R value is 23.5 for 13878 reflections in the resolution range 44.29 to 3.10 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1NH3

PubMed: 12533542




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