NDB ID: PD0397


Title:STRUCTURE OF A TRAPPED ENDONUCLEASE III-DNA COVALENT INTERMEDIATE: ESTRANGED-ADENINE COMPLEX
Molecular Description:ENDONUCLEASE III/DNA
Structural Features:B DOUBLE HELIX, OVERHANGING BASE
Nucleic Acid Sequence:
ChainB:(DA) (DA) (DG) (DA) (DC) (DA) (DT) (DG) (DG) (DA) (DC)
ChainC:(DT) (DG) (DT) (DC) (DC) (DA) (PED) (DG) (DT) (DC) (DT)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Fromme, J.C., Verdine, G.L.
Structure of a Trapped Endonuclease III-DNA Covalent Intermediate
Embo J. , 22, pp. 3461 - 3471, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 67.732b = 106.516c = 41.661(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 24.1 for 14943 reflections in the resolution range 24.51 to 2.20 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1ORP

PubMed: 12840008




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