NDB ID: PD0445


Title:CRYSTAL STRUCTURE OF UP1 COMPLEXED WITH D(TTAGGGTTAG(6-MI)G); A HUMAN TELOMERIC REPEAT CONTAINING 6-METHYL-8-(2-DEOXY-BETA-RIBOFURANOSYL)ISOXANTHOPTERIDINE (6-MI)
Molecular Description:
Heterogeneous nuclear ribonucleoprotein A1/DNA complex
Structural Features:SINGLE STRAND
Nucleic Acid Sequence:
ChainB:(DT) (DT) (DA) (DG) (DG) (DG) (DT) (DT) (DA) (DG) (6MI) (DG)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Myers, J.C., Moore, S.A., Shamoo, Y.
Structure-based incorporation of 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures
J.Biol.Chem. , 278, pp. 42300 - 42306, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 51.622b = 51.622c = 171.472(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 23.5 for 11985 reflections in the resolution range 19.80 to 2.60 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Links

The RCSB Protein Data Bank: 1PGZ

PubMed: 12904298




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