NDB ID: PD0451


Title:CRYSTAL STRUCTURE OF UP1 COMPLEXED WITH D(TAGG(6MI)TTAGGG): A HUMAN TELOMERIC REPEAT CONTAINING 6-METHYL-8-(2-DEOXY-BETA-RIBOFURANOSYL)ISOXANTHOPTERIDINE (6MI)
Molecular Description:
Heterogeneous nuclear ribonucleoprotein A1/DNA Complex
Structural Features:SINGLE STRAND, LOOP, FLIPPED-OUT BASES, NICKED
Nucleic Acid Sequence:
ChainB:(DT) (DA) (DG) (DG) (6MI) (DT) (DT) (DA) (DG) (DG) (DG)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Myers, J.C., Moore, S.A., Shamoo, Y.
Structure-based incorporation of 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures
J.BIOL.CHEM. , 278, pp. 42300 - 42306, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 51.807b = 51.807c = 172.330(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 23.4 for 13930 reflections in the resolution range 19.89 to 2.10 Ångstroms with I > 0.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Links

The RCSB Protein Data Bank: 1PO6

PubMed: 12904298




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