NDB ID: PD0503


Title:CRYSTAL STRUCTURE OF DNA POLYMERASE LAMBDA COMPLEXED WITH A TWO NUCLEOTIDE GAP DNA MOLECULE
Molecular Description:
NA polymerase lambda (E.C.2.7.7.7)/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsB,F,J,N:(DC) (DG) (DG) (DC) (DA) (DA) (DC) (DG) (DC) (DA) (DC)
ChainsC,G,K,O:(DG) (DT) (DG) (DC) (DG)
ChainsD,H,L,P:(DG) (DC) (DC) (DG)
Protein Sequence:
ChainsA,E,I,M: Click here for sequence.
Primary Citation:Garcia-Diaz, M., Bebenek, K., Krahn, J.M., Blanco, L., Kunkel, T.A., Pedersen, L.C.
A structural solution for the DNA polymerase lambda-dependent repair of DNA gaps with minimal homology.
Mol.Cell , 13, pp. 561 - 572, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 191.321b = 99.034c = 104.838(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 22.7 for 108665 reflections in the resolution range 19.92 to 2.10 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)1234

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1RZT

PubMed: 14992725




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