NDB ID: PD0517


Title:CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE
Molecular Description:TrwC/DNA (25-MER)
Structural Features:SINGLE STRAND, HAIRPIN LOOP
Nucleic Acid Sequence:
ChainB:(DG) (DC) (DG) (DC) (DA) (DC) (DC) (DG) (DA) (DA) (DA) (DG) (DG) (DT) (DG) (DC) (DG) (DT) (DA) (DT) (DT) (DG) (DT) (DC) (DT)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Boer, R., Russi, S., Guasch, A., Lucas, M., Blanco, A.G., Perez-Luque, R., Coll, M., de la Cruz, F.
Unveiling the molecular mechanism of a conjugative relaxase: The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site.
J.Mol.Biol. , 358, pp. 857 - 869, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 92.731b = 92.731c = 208.855(Ångstroms)
= 90. = 90. = 120.(degrees)
Refinement:The structure was refined using the REFMAC program. The R value is 20.6 for 24598 reflections in the resolution range 43.85 to 2.28 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1S6M

PubMed: 16540117




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey