NDB ID: PD0520


Title:CRYSTAL STRUCTURE OF THE VIRAL ZALPHA DOMAIN BOUND TO LEFT-HANDED Z-DNA
Molecular Description:34L PROTEIN/DNA Complex
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsC, D: (DT) (DC) (DG) (DC) (DG) (DC) (DG)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Ha, S.C., Lokanath, N.K., Van Quyen, D., Wu, C.A., Lowenhaupt, K., Rich, A., Kim, Y.G., Kim, K.K.
A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Proc.Natl.Acad.Sci.USA , 101, pp. 14367 - 14372, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 51.203b = 92.452c = 48.012(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:lithium sulfate, magnesium chloride, cacodylate, H2O
Reservoir:lithium sulfate, magnesium chloride, H2O
Refinement:The structure was refined using the CNS program. The R value is 23.75 for 15266 reflections in the resolution range 20.0 to 2.0 Ångstroms with Fobs > 0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1SFU

PubMed: 15448208




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