NDB ID: PD0529


Title:STRUCTURE OF THE K38A MUTANT OF ECORV BOUND TO COGNATE DNA AND MN2+
Molecular Description:
Type II restriction enzyme EcoRV (E.C.3.1.21.4)/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC,E:(DA) (DA) (DA) (DG) (DA) (DT)
ChainsD,F:(DA) (DT) (DC) (DT) (DT)
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Horton, N.C., Perona, J.J.
DNA cleavage by EcoRV endonuclease: two metal ions in three metal ion binding sites
Biochemistry , 43, pp. 6841 - 6857, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 63.710b = 58.690c = 82.100(Ångstroms)
= 90.00 = 107.70 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 20.1 for 32988 reflections in the resolution range 20.0 to 2.10 Ångstroms with Fobs > 2. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1STX

PubMed: 15170321




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