NDB ID: PD0535


Title:DPO WITH AT MATCHED
Molecular Description:DNA polymerase IV/DNA
Structural Features:A DOUBLE HELIX, FLIPPED-OUT BASES,OVERHANGING BASES
Nucleic Acid Sequence:
ChainsE,F,G,H:Click here for sequence.
ChainsI,J,K,L:Click here for sequence.
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Trincao, J., Johnson, R.E., Wolfle, W.T., Escalante, C.R., Prakash, S., Prakash, L., Aggarwal, A.K.
Dpo4 is hindered in extending a G.T mismatch by a reverse wobble
Nat.Struct.Mol.Biol. , 11, pp. 457 - 462, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 104.800b = 100.300c = 110.800(Ångstroms)
= 90.00 = 95.20 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 20.5 for 135485 reflections in the resolution range 30.00 to 2.00 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Enlarge Biological Assembly 3
Enlarge Biological Assembly 4



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)1234

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1S9F

PubMed: 15077104




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