NDB ID: PD0563


Title:HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINE
Molecular Description:5'-D(CpCpGpApCpApGpCpGpCpApTpCpApGp
C)-3'/ 5'-D(GpCpTpGpApTpGpCpGpCp
C)-3'/ 5'-D(pGpTpCpGp
G)-3'/ DNA polymerase beta
Structural Features:B DOUBLE HELIX, NICKED
Nucleic Acid Sequence:
ChainD:Click here for sequence.
ChainP:Click here for sequence.
ChainT:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Krahn, J.M., Beard, W.M., Wilson, S.H.
STRUCTURAL INSIGHTS INTO DNA POLYMERASE BETA DETERRENTS FOR MISINCORPORATION SUPPORT OF AN INDUCED-FIT MECHANISM FOR FIDELITY
Structure , 12, pp. 1823 - 1832, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 54.68b = 79.65c = 54.67(Ångstroms)
= 90. = 106.77 = 90.(degrees)
Refinement:The structure was refined using the CNS program. The R value is 17.9 for 29439 reflections in the resolution range 50.00 to 2.00 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1TV9

PubMed: 15458631




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