NDB ID: PD0563
Title:
HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINE
Molecular Description:
5'-D(CpCpGpApCpApGpCpGpCpApTpCpApGp
C)-3'/ 5'-D(GpCpTpGpApTpGpCpGpCp
C)-3'/ 5'-D(pGpTpCpGp
G)-3'/ DNA polymerase beta
Structural Features:
B DOUBLE HELIX, NICKED
Nucleic Acid Sequence:
Chain
D:
Click here for sequence.
Chain
P:
Click here for sequence.
Chain
T:
Click here for sequence.
Protein Sequence:
Chain
A:
Click here for sequence.
Primary Citation:
Krahn, J.M., Beard, W.M., Wilson, S.H.
STRUCTURAL INSIGHTS INTO DNA POLYMERASE BETA DETERRENTS FOR MISINCORPORATION SUPPORT OF AN INDUCED-FIT MECHANISM FOR FIDELITY
Structure
,
12
, pp. 1823 - 1832, 2004.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
1
2
1
1
Cell Constants:
a = 54.68
b = 79.65
c = 54.67
(Ångstroms)
= 90.
= 106.77
= 90.
(degrees)
Refinement:
The structure was refined using the CNS program. The R value is 17.9 for 29439 reflections in the resolution range 50.00 to 2.00 Ångstroms with Fobs > 0.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1TV9
PubMed:
15458631
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