NDB ID: PD0587


Title:CRYSTAL STRUCTURE OF HUMAN DNA LIGASE I BOUND TO 5'-ADENYLATED, NICKED DNA
Molecular Description:DNA ligase I (E.C. 6.5.1.1)/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Pascal, J.M., O'Brien, P.J., Tomkinson, A.E., Ellenberger, T.
Human DNA ligase I completely encircles and partially unwinds nicked DNA.
Nature , 432, pp. 473 - 478, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 63
Cell Constants:
a = 161.889b = 161.889c = 88.455(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1.80 program. The R value is 23.5 for 24943 reflections in the resolution range 20.00 to 3.00 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1X9N

PubMed: 15565146




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey