NDB ID: PD0593


Title:STRUCTURE OF A HIGH-FIDELITY POLYMERASE BOUND TO A BENZO[A]PYRENE ADDUCT THAT BLOCKS REPLICATION
Molecular Description:
DNA polymerase I (E.C.2.7.7.7)/DNA Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainB:(DG) (DG) (DG) (DA) (DT) (DG) (DG) (DT) (DG) (DC)
ChainC:(DA) (DC) (DT) (DC) (DG) (DC) (DA) (DC) (DC) (DA) (DT) (DC) (DC) (DC) (DT)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Hsu, G.W., Huang, X., Luneva, N.P., Geacintov, N.E., Beese, L.S.
Structure of a High Fidelity DNA Polymerase Bound to a Benzo[a]pyrene Adduct That Blocks Replication
J.Biol.Chem. , 280, pp. 3764 - 3770, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 88.752b = 93.733c = 104.512(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 22.1 for 67114 reflections in the resolution range 42.76 to 1.90 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1XC9

PubMed: 15548515




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