NDB ID: PD0595


Title:HINCII BOUND TO CLEAVED COGNATE DNA GTCGAC AND MN2+
Molecular Description:5'-D(GpCpCpGpGpTpC)-3'/ 5'-D(pGpApCpCpGp
G)-3'/ Type II restriction enzyme HincII
Structural Features:B DOUBLE HELIX, OVERHANGING BASES, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainsE,G,I,K:(DG) (DC) (DC) (DG) (DG) (DT) (DC)
ChainsF,H,J,L:(DG) (DA) (DC) (DC) (DG) (DG)
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Etzkorn, C., Horton, N.C.
Mechanistic Insights from the Structures of HincII Bound to Cognate DNA Cleaved from Addition of Mg(2+) and Mn(2+)
J.Mol.Biol. , 343, pp. 833 - 849, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 66.8b = 178.2c = 257.3(Ångstroms)
= 90.0 = 90.0 = 90.0(degrees)
Refinement:The structure was refined using the CNS program. The R value is 19.9 for 53281 reflections in the resolution range 50. to 2.5 Ångstroms with Fobs > 2. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1XHV

PubMed: 15476804




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey