NDB ID: PD0616


Title:ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP-GLUCOSE AND DNA CONTAINING AN ABASIC SITE
Molecular Description:
DNA alpha-glucosyltransferase/DNA Complex
Structural Features:B DOUBLE HELIX, BULGE
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Lariviere, L., Sommer, N., Morera, S.
Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol. , 352, pp. 139 - 150, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 47.363b = 123.964c = 86.628(Ångstroms)
= 90.00 = 101.83 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 19.7 for 37879 reflections in the resolution range 20. to 2.4 Ångstroms with Fobs > 1. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1Y6F

PubMed: 16081100




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