NDB ID: PD0617


Title:ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13_MER DNA CONTAINING A HMU BASE AT 2.8 A RESOLUTION
Molecular Description:
DNA alpha-glucosyltransferase/DNA Complex
Structural Features:B DOUBLE HELIX, BULGE
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Lariviere, L., Sommer, N., Morera, S.
Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol. , 352, pp. 139 - 150, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 46.994b = 120.520c = 86.807(Ångstroms)
= 90.00 = 94.68 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 21.9 for 23542 reflections in the resolution range 20. to 2.8 Ångstroms with Fobs > 1. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1Y6G

PubMed: 16081100




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