NDB ID: PD0622


Title:T4DAM IN COMPLEX WITH ADOHCY AND 13-MER OLIGONUCLEOTIDE MAKING NON- AND SEMI-SPECIFIC (~1/4) CONTACT
Molecular Description:
DNA adenine methylase (EC 2.1.1.72)/DNA Complex
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Horton, J.R., Liebert, K., Hattman, S., Jeltsch, A., Cheng, X.
Transition from Nonspecific to Specific DNA Interactions along the Substrate-Recognition Pathway of Dam Methyltransferase.
Cell(Cambridge,Mass.) , 121, pp. 349 - 361, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 38.900b = 125.800c = 73.200(Ångstroms)
= 90.00 = 104.70 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 21.4 for 28663 reflections in the resolution range 28.0 to 2.29 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1YF3

PubMed: 15882618




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