NDB ID: PD0626


Title:CRYSTAL STRUCTURE OF VITAMIN D RECEPTOR AND 9-CIS RETINOIC ACID RECEPTOR DNA-BINDING DOMAINS BOUND TO A DR3 RESPONSE ELEMENT
Molecular Description:
Vitamin D3 Receptor/Retinoic acid receptor RXR-alpha/DNA Complex
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainC:Click here for sequence.
ChainD:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
ChainB: Click here for sequence.
Primary Citation:Shaffer, P.L., Gewirth, D.T.
Structural analysis of RXR-VDR interactions on DR3 DNA
J.Steroid Biochem.Mol.Biol. , 89-90, pp. 215 - 219, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 123.104b = 57.049c = 73.438(Ångstroms)
= 90.00 = 110.31 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 23.2 for 8849 reflections in the resolution range 50. to 3.00 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1YNW

PubMed: 15225774




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