NDB ID: PD0627


Title:ANALYSIS OF THE 2.0A CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX OF HUMAN PDEF ETS DOMAIN BOUND TO THE PROSTATE SPECIFIC ANTIGEN REGULATORY SITE
Molecular Description:
SAM pointed domain containing ets transcription factor/DNA complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:Click here for sequence.
ChainB:Click here for sequence.
Protein Sequence:
ChainC: Click here for sequence.
Primary Citation:Wang, Y., Feng, L., Said, M., Balderman, S., Fayazi, Z., Liu, Y., Ghosh, D., Gulick, A.M.
Analysis of the 2.0 A Crystal Structure of the Protein-DNA Complex of the Human PDEF Ets Domain Bound to the Prostate Specific Antigen Regulatory Site
Biochemistry , 44, pp. 7095 - 7106, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 36.160b = 71.476c = 39.136(Ångstroms)
= 90.00 = 113.45 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.2 program. The R value is 20.3 for 11799 reflections in the resolution range 35.90 to 2.00 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1YO5

PubMed: 15882048




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