NDB ID: PD0630


Title:CATALYTICALLY INACTIVE HOGG1 CROSSLINKED WITH 7-DEAZA-8-AZAGUANINE CONTAINING DNA
Molecular Description:
8-oxoguanine DNA glycosylase (EC 3.2.2.-)/DNA Complex
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASE, OVERHANGING BASES
Nucleic Acid Sequence:
ChainB:Click here for sequence.
ChainC:Click here for sequence.
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Banerjee, A., Yang, W., Karplus, M., Verdine, G.L.
Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.
Nature , 434, pp. 612 - 618, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 65   2
Cell Constants:
a = 92.322b = 92.322c = 210.744(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 21.3 for 15920 reflections in the resolution range 39.98 to 2.60 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1YQL

PubMed: 15800616




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