NDB ID: PD0668


Title:X-RAY STRUCTURE OF A KAPOSI'S SARCOMA HERPESVIRUS LANA PEPTIDE BOUND TO THE NUCLEOSOMAL CORE
Molecular Description:Histone H3
H4
H2A
H2B/LANA Peptide/DNA
Structural Features:B DOUBLE HELIX, INTERNAL LOOP
Nucleic Acid Sequence:
ChainsI, J:Click here for sequence.
Protein Sequence:
ChainsA, E, B, F, C, G, D, H, KClick here for sequences.
Primary Citation:Barbera, A.J., Chodaparambil, J.V., Kelley-Clarke, B., Joukov, V., Walter, J.C., Luger, K., Kaye, K.M.
The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.
Science , 311, pp. 856 - 861, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 106.162b = 109.599c = 182.237(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:Manganese chloride, Potassium chloride, Potassium cacodylate
Reservoir:Potassium chloride, Potassium cacodylate
Refinement:The structure was refined using the CNS program. The R value is 22.2 for 43460 reflections in the resolution range 50 to 2.9 Ångstroms with I > 0 sigma(I).

Biological Unit 1
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Asymmetric Unit
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1ZLA

PubMed: 16469929




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