NDB ID: PD0693


Title:CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS
Molecular Description:
DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE(E.C.3.5.4.-)/DNA complex
Structural Features:DOUBLE HELIX, overhanging bases, BULGES, Z-DNA STEM
Nucleic Acid Sequence:
ChainE:Click here for sequence.
ChainF:Click here for sequence.
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Ha, S.C., Lowenhaupt, K., Rich, A., Kim, Y.G., Kim, K.K.
Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Nature , 437, pp. 1183 - 1186, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61
Cell Constants:
a = 110.765b = 110.765c = 61.762(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1.24 program. The R value is 23.8 for 11327 reflections in the resolution range 20.00 to 2.60 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 2ACJ

PubMed: 16237447




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