NDB ID: PD0698


Title:FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS
Molecular Description:PROTEIN/DNA Complex
Nucleic Acid Sequence:
ChainsC,E:Click here for sequence.
ChainsD,F:Click here for sequence.
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Vaisman, A., Ling, H., Woodgate, R., Yang, W.
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J. , 24, pp. 2957 - 2967, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 97.867b = 101.463c = 105.642(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 20.7 for 22411 reflections in the resolution range 30.0 to 2.900 Ångstroms with Fobs > 0.00 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2AGP

PubMed: 16107880




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