NDB ID: PD0816


Title:STRUCTURE OF VARIOLA TOPOISOMERASE COVALENTLY BOUND TO DNA
Molecular Description:
DNA topoisomerase 1 (E.C.5.99.1.2)/DNA Complex
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainY:(DT) (DT) (DG) (DT) (DC) (DG) (DC) (DC) (DC) (DT) (DT)
ChainZ:(DT) (DA) (DA) (DT) (DA) (DA) (DG) (DG) (DG) (DC) (DG) (DA) (DC) (DA)
Protein Sequence:
ChainX: Click here for sequence.
Primary Citation:Perry, K., Hwang, Y., Bushman, F.D., Van Duyne, G.D.
Structural basis for specificity in the poxvirus topoisomerase.
Mol.Cell , 23, pp. 343 - 354, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 68.523b = 138.232c = 113.079(Ångstroms)
= 90.000 = 90.000 = 90.000(degrees)
Refinement:The structure was refined using the REFMAC 5.2.0005 program. The R value is 19.1 for 15090 reflections in the resolution range 50.0 to 2.700 Ångstroms with Fobs > 0.00 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2H7F

PubMed: 16885024




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