NDB ID: PDE002


Title:THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS
Molecular Description:ECO RV (E.C.3.1.21.4)/DNA COMPLEX
Structural Features:B DOUBLE HELIX, KINKED
Nucleic Acid Sequence:
ChainsC,D,E,F:(DC) (DG) (DA) (DG) (DC) (DT) (DC) (DG)
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Winkler, F.K., Banner, D.W., Oefner, C., Tsernoglou, D., Brown, R.S., Heathman, S.P., Bryan, R.K., Martin, P.D., Petratos, K., Wilson, K.S.
The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments.
EMBO J. , 12, pp. 1781 - 1795, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 68.500b = 79.600c = 66.400(Ångstroms)
= 90.00 = 104.60 = 90.00(degrees)
Refinement:The structure was refined using the TNT program. The R value is 17.8 for 11127 reflections in the resolution range 6.000 to 3.000 Ångstroms with Fobs > 1.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2RVE

PubMed: 8491171




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