NDB ID: PDE0105


Title:DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF PYROPHOSPHATE (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR)
Molecular Description:
DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX

SOAKED IN THE PRESENCE OF PYROPHOSPHATE AND MGCL2
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainP: (DC) (DA) (DG) (DA) (DT) (DG)
ChainT: (DC) (DA) (DT) (DC) (DT) (DG) (DT)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Pelletier, H., Sawaya, M.R.
Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.
Biochemistry , 35, pp. 12778 - 12787, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 178.658b = 57.824c = 48.490(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the TNT V. 5-D program. The R value is 16.5 for 8809 reflections in the resolution range 20.000 to 3.100 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 9ICP

PubMed: 8841120




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