NDB ID: PDE0118


Title:COMPLEX OF HUMAN ALPHA-THROMBIN WITH A 15MER OLIGONUCLEOTIDE GGTTGGTGTGGTTGG (BASED ON X-RAY MODEL OF DNA)
Molecular Description:
ALPHA-THROMBIN (E.C.3.4.21.5)/DNA COMPLEX + D-PHE-PRO-ARG-CHLOROMETHYLKETONE (PPACK)
Structural Features:QUADRUPLE HELIX
Nucleic Acid Sequence:
ChainD:(DG) (DG) (DT) (DT) (DG) (DG) (DT) (DG) (DT) (DG) (DG) (DT) (DT) (DG) (DG)
Protein Sequence:
ChainH: Click here for sequence.
ChainL: Click here for sequence.
Primary Citation:Padmanabhan, K., Tulinsky, A.
An ambiguous structure of a DNA 15-mer thrombin complex.
Acta Crystallogr.,Sect.D , 52, pp. 272 - 282, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 58.280b = 77.610c = 100.020(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLIN, PROLSQ program. The R value is 16.1 for 7717 reflections in the resolution range 10.000 to 2.800 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Links

The RCSB Protein Data Bank: 1HAP

PubMed: 15299700




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