NDB ID: PDE0133


Title:CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OF TWO DATP RESIDUES
Molecular Description:DNA POLYMERASE I/DNA COMPLEX
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainP: (DG) (DC) (DA) (DT) (DC) (DA) (DT) (DG) (DC) (DA) (DA)
ChainT: (DT) (DA) (DT) (DT) (DG) (DC) (DA) (DT) (DG) (DA) (DT) (DG) (DC)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Kiefer, J.R., Mao, C., Braman, J.C., Beese, L.S.
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal.
Nature , 391, pp. 304 - 307, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 86.241b = 93.275c = 106.374(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 24.8 for 72346 reflections in the resolution range 20.00 to 1.80 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 4BDP

PubMed: 9440698




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey
University of New Jersey