NDB ID: PDE0144


Title:HOMING ENDONUCLEASE/DNA COMPLEX
Molecular Description:
INTRON-ENCODED ENDONUCLEASE I-PPOI/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC, D: (DT) (DT) (DG) (DA) (DC) (DT) (DC) (DT) (DC) (DT) (DT) (DA) (DA) (DG) (DA) (DG) (DA) (DG) (DT) (DC) (DA)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Flick, K.E., Jurica, M.S., Monnat Jr., R.J., Stoddard, B.L.
DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoI.
Nature , 394, pp. 96 - 101, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 31   1
Cell Constants:
a = 113.900b = 113.900c = 88.500(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:EDTA, SPERMINE, NaCl, SODIUM CITRATE, PEG 4000
Reservoir:PEG 4000 SODIUM CITRATE, NaCl
Refinement:The structure was refined using the X-PLOR 3.8 program. The R value is 21.2 for 30671 reflections in the resolution range 50.000 to 2.200 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1IPP

PubMed: 9665136




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