NDB ID: PDE076


Title:DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR)
Molecular Description:
DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 3'-AZIDO-3'-DEOXYTHYMIDINE-5'- TRIPHOSPHATE

SOAKED IN THE PRESENCE OF AZT-TP AND MNCL2
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainP:(DT) (DC) (DT) (DA) (DA) (DT) (DG)
ChainT:(DC) (DA) (DT) (DT) (DA) (DG) (DA) (DA)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Pelletier, H., Sawaya, M.R., Wolfle, W., Wilson, S.H., Kraut, J.
A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta.
Biochemistry , 35, pp. 12762 - 12777, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 179.687b = 57.631c = 48.285(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the TNT V. 5-D program. The R value is 18.1 for 13094 reflections in the resolution range 20.000 to 2.700 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 8ICO

PubMed: 8841119




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey