NDB ID: PDR050


Title:A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
Molecular Description:
TRANSCRIPTION FACTOR NF-KB P65/DNA COMPLEX
Structural Features:B DOUBLE HELIX, THE DNA IS BENT 25 DEGREES
Nucleic Acid Sequence:
ChainsC,D:(DC) (DG) (DG) (DC) (DT) (DG) (DG) (DA) (DA) (DA) (DT) (DT) (DT) (DC) (DC) (DA) (DG) (DC) (DC) (DG)
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Chen, Y.Q., Ghosh, S., Ghosh, G.
A novel DNA recognition mode by the NF-kappa B p65 homodimer.
Nat.Struct.Biol. , 5, pp. 67 - 73, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 65.690b = 81.080c = 167.560(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.843 program. The R value is 22.2 for 20845 reflections in the resolution range 6.000 to 2.700 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1RAM

PubMed: 9437432




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