NDB ID: PDT039


Title:ZIF268 ZINC FINGER-DNA COMPLEX
Molecular Description:ZIF268 ZINC FINGER PEPTIDE/DNA COMPLEX
Structural Features:B DOUBLE HELIX, OVERHANGING BASE
Nucleic Acid Sequence:
ChainB: (DA) (DG) (DC) (DG) (DT) (DG) (DG) (DG) (DC) (DG) (DT)
ChainC: (DT) (DA) (DC) (DG) (DC) (DC) (DC) (DA) (DC) (DG) (DC)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Elrod-Erickson, M., Rould, M.A., Nekludova, L., Pabo, C.O.
Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions.
Structure , 4, pp. 1171 - 1180, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 45.400b = 56.200c = 130.800(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:WATER, NaCl, BIS-TRIS-PROPANE_HCL
Reservoir:WATER, PEG 400
Refinement:The structure was refined using the X-PLOR program. The R value is 19.5 for 19207 reflections in the resolution range 6.000 to 1.600 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1AAY

PubMed: 8939742




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