NDB ID: PH0015


Title:COMPLETE RNA POLYMERASE II ELONGATION COMPLEX WITH SUBSTRATE ANALOGUE GMPCPP
Molecular Description:RNA polymerase II (E.C.2.7.7.6)/DNA/RNA
Structural Features:RH DOUBLE HELIX, overhanging bases, nicked
Nucleic Acid Sequence:
ChainN:Click here for sequence.
ChainP:Click here for sequence.
ChainT:Click here for sequence.
Protein Sequence:
ChainsA, B, C, D, E, F, G, H, I, J, K, LClick here for sequences.
Primary Citation:Kettenberger, H., Armache, K.-J., Cramer, P.
Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
Mol.Cell , 16, pp. 955 - 965, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 222.460b = 393.070c = 283.690(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement: The R value is 29.7 for 58178 reflections in the resolution range 50. to 4.5 Ångstroms with Fobs > 3. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1Y77

PubMed: 15610738

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1Y77




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