NDB ID: PH0016


Title:BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID
Molecular Description:
ribonuclease H-related protein/RNA/DNA Complex
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainC: G A C A C C U G A U U C
ChainD: (DG) (DA) (DA) (DT) (DC) (DA) (DG) (DG) (DT) (DG) (DT) (DC)
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Nowotny, M., Gaidamakov, S.A., Crouch, R.J., Yang, W.
Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.
Cell (CAMBRIDGE,MASS.) , 121, pp. 1005 - 1016, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 136.393b = 36.964c = 93.202(Ångstroms)
= 90.00 = 121.51 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:MPD, NaCl, HEPES, H2O
Reservoir:MPD, NaCl, H2O
Refinement:The structure was refined using the CNS 1.1 program. The R value is 20.6 for 29836 reflections in the resolution range 30 to 1.85 Ångstroms with Fobs > 1 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1ZBI

PubMed: 15989951




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