NDB ID: PH0019


Title:B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
Molecular Description:
RIBONUCLEASE H (E.C.3.1.26.4)/RNA/DNA complex
Structural Features:RH DOUBLE HELIX, overhanging bases
Nucleic Acid Sequence:
ChainB:U C G A C A
ChainC:(DA) (DT) (DG) (DT) (DC) (DG)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Nowotny, M., Yang, W.
Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.
Embo J. , 25, pp. 1924 - 1933, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 82.072b = 36.858c = 61.796(Ångstroms)
= 90.00 = 96.47 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 18.2 for 19921 reflections in the resolution range 30. to 1.65 Ångstroms with I > 3.6 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2G8F

PubMed: 16601679




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