NDB ID: PH0024


Title:B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (REACTION PRODUCT)
Molecular Description:
RIBONUCLEASE H (E.C.3.1.26.4)/RNA/DNA complex
Structural Features:RH DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainB: U C G A C A
ChainC: (DA) (DT) (DG) (DT) (DC) (DG)
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Nowotny, M., Yang, W.
Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.
Embo J. , 25, pp. 1924 - 1933, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 81.871b = 36.809c = 62.144(Ångstroms)
= 90.00 = 97.17 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:EtOH, Tris, H2O
Reservoir:EtOH, Tris
Refinement:The structure was refined using the CNS 1.1 program. The R value is 19.8 for 14810 reflections in the resolution range 30 to 1.85 Ångstroms with I > 2.4 sigma(I).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 2G8V

PubMed: 16601679




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