NDB ID: PH0025
Title:
B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH CA2+ AND RNA/DNA HYBRID
Molecular Description:
RIBONUCLEASE H (E.C.3.1.26.4)/RNA/DNA complex
Structural Features:
RH DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
Chain
B:
U C G A C A
Chain
C:
(DA) (DT) (DG) (DT) (DC) (DG)
Protein Sequence:
Chain
A:
Click here for sequence.
Primary Citation:
Nowotny, M., Yang, W.
Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.
Embo J.
,
25
, pp. 1924 - 1933, 2006.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
C
1
2
1
Cell Constants:
a = 81.671
b = 37.091
c = 61.980
(Ångstroms)
= 90.00
= 96.74
= 90.00
(degrees)
Refinement:
The structure was refined using the CNS 1.1 program. The R value is 21.5 for 10677 reflections in the resolution range 30. to 2.05 Ångstroms with I > 2.3 sigma(I).
Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
2G8W
PubMed:
16601679
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