NDB ID: PH0039


Title:CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG AND ANTIBIOTIC STREPTOLYDIGIN
Molecular Description:
DNA-directed RNA polymerase/DNA/RNA/Streptolydigin Complex
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsG,X:Click here for sequence.
ChainsH,Y:Click here for sequence.
ChainsI,Z:Click here for sequence.
Protein Sequence:
ChainsA,B,K,L: Click here for sequence.
ChainsC,M: Click here for sequence.
ChainsD,N: Click here for sequence.
ChainsE,O: Click here for sequence.
Primary Citation:Vassylyev, D.G., Vassylyeva, M.N., Zhang, J., Palangat, M., Artsimovitch, I., Landick, R.
Structural basis for substrate loading in bacterial RNA polymerase.
Nature , 448, pp. 163 - 168, 2007.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41
Cell Constants:
a = 155.379b = 155.379c = 496.992(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 23.4 for 207148 reflections in the resolution range 40.00 to 3.00 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2PPB

PubMed: 17581591




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