NDB ID: PR0010


Title:HEPATITIS DELTA VIRUS RIBOZYME
Molecular Description:
HDV RIBOZYME/U1A PROTEIN (RNA BINDING DOMAIN) COMPLEX
Structural Features:SINGLE STRAND, LOOPS, BULGES
Nucleic Acid Sequence:
ChainB: G G C C G G C A U G G U C C C A G C C U C C U C G C U G G C G C C G G C U G G G C A A C A C C A U U G C A C U C C G G U G G C G A A U G G G A C
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Ferre-D'Amare, A.R., Zhou, K., Doudna, J.A.
Crystal structure of a hepatitis delta virus ribozyme.
Nature , 395, pp. 567 - 574, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 109.350b = 109.350c = 190.680(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Refinement:The structure was refined using the CNS 0.9 program. The R value is 24.6 for 18903 reflections in the resolution range 18.58 to 2.30 Ångstroms with I > 0 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1CX0

PubMed: 9783582




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey