NDB ID: PR0074


Title:CRYSTAL STRUCTURE OF A HAIRPIN RIBOZYME IN THE CATALYTICALLY-ACTIVE CONFORMATION
Molecular Description:
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN/RNA INHIBITOR/RNA RIBOZYME COMPLEX
Structural Features:DOUBLE HELIX, LOOP, BULGES, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainsA, D:Click here for sequence.
ChainsB, E:Click here for sequence.
Protein Sequence:
ChainsC, F: Click here for sequence.
Primary Citation:Rupert, P.B., Massey, A.P., Sigurdsson, S.T., Ferre-D'Amare, A.R.
Transition state stabilization by a catalytic RNA
Science , 298, pp. 1421 - 1424, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 256.300b = 44.100c = 102.400(Ångstroms)
= 90.00 = 109.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:CaCl2, NH4Cl, MPD
Reservoir:CaCl2, NH4Cl, MPD
Refinement:The structure was refined using the CNS 1.0 program. The R value is 22.9 for 41156 reflections in the resolution range 61.07 to 2.40 Ångstroms with I > 0.0 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1M5K

PubMed: 11298439




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