NDB ID: PR0083


Title:DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX
Molecular Description:50S ribosomal protein L5/RNA Complex
Structural Features:SINGLE STRAND
Nucleic Acid Sequence:
ChainsC, D: G G C A C C U G A C C C C A U G C C G A A C U C A G A A G U G C C C
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Perederina, A., Nevskaya, N., Nikonov, O., Nikulin, A., Dumas, P., Yao, M., Tanaka, I., Garber, M., Gongadze, G., Nikonov, S.
Detailed analysis of RNA-protein interactions within the bacterial ribosomal protein L5/5S rRNA complex
RNA , 8, pp. 1548 - 1547, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 51.89b = 99.60c = 65.73(Ångstroms)
= 90.00 = 100.05 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:sodium cacodylate, magnesium acetate, potassium chlorate, PEG 8000
Refinement:The structure was refined using the CNS 1.1 program. The R value is 21 for 21043 reflections in the resolution range 14.91 to 2.50 Ångstroms with Fobs > 2 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1MJI

PubMed: 12515387




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