NDB ID: PR0094


Title:CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH-AFFINITY RNA APTAMER
Molecular Description:
Nuclear factor NF-kappa-B p105 subunit/RNA Complex
Structural Features:SINGLE STRAND, LOOP
Nucleic Acid Sequence:
ChainsC,D:C A U A C U U G A A A C U G U A A G G U U G G C G U A U G
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Huang, D.B., Vu, D., Cassiday, L.A., Zimmerman, J.M., Maher III, L.J., Ghosh, G.
Crystal structure of NF-kappaB (p50)2 complexed to a high-affinity RNA aptamer.
Proc.Natl.Acad.Sci.USA , 100, pp. 9268 - 9273, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 76.753b = 151.059c = 95.628(Ångstroms)
= 90.00 = 105.95 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 20.8 for 33180 reflections in the resolution range 28.99 to 2.45 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1OOA

PubMed: 12886018




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