NDB ID: PR0098


Title:CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB
Molecular Description:SSRA-BINDING PROTEIN/RNA Complex
Structural Features:SINGLE STRAND, LOOPS, HAIRPIN LOOP
Nucleic Acid Sequence:
ChainsB, D: G G G G G C G G A A A G G A U U C G A C G G G G A C U U C G G U C C U C G G A C G C G G G U U C G A U U C C C G C C G C C U C C A C C A
Protein Sequence:
ChainsA, C: Click here for sequence.
Primary Citation:Gutmann, S., Haebel, P.W., Metzinger, L., Sutter, M., Felden, B., Ban, N.
Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB
Nature , 424, pp. 699 - 703, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 99.680b = 99.680c = 207.050(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:Isopropanol, cacodylate, ammonium acetate, magnesium acetate, calcium acetate, H2O
Reservoir:cacodylate, magnesium acetate, calcium acetate, H2O
Refinement:The structure was refined using the CNS 1.1 program. The R value is 30.2 for 16854 reflections in the resolution range 19.94 to 3.20 Ångstroms with Fobs > 0 sigma(Fobs).

Biological Unit 1
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RNAML File

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1P6V

PubMed: 12904796




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