NDB ID: PR0101


Title:CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE
Molecular Description:
Queuine tRNA-ribosyltransferase (E.C.2.4.2.29)/RNA complex
Structural Features:SINGLE STRAND, LOOP, HAIRPIN LOOP, BULGES, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainsE,F:A G C A C G G C U N U A A A C C G U G C
Protein Sequence:
ChainsA,B,C,D: Click here for sequence.
Primary Citation:Xie, W., Liu, X., Huang, R.H.
Chemical trapping and crystal structure of a catalytic tRNA guanine transglycosylase covalent intermediate
Nat.Struct.Biol. , 10, pp. 781 - 788, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 4
Cell Constants:
a = 264.856b = 264.856c = 55.911(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 18.1 for 40143 reflections in the resolution range 30.0 to 2.9 Ångstroms with I > 2.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Enlarge Biological Assembly 3
Enlarge Biological Assembly 4



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)1234

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1Q2R

PubMed: 12949492




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