NDB ID: PR0108


Title:MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO-CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX
Molecular Description:PROTEIN/RNA Complex
Structural Features:SINGLE STRAND, LOOP, internal loop
Nucleic Acid Sequence:
ChainsC, D: G C (5BU) C (5BU) G A C C G A A A G G C G U G A (5BU) G A G C
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Moore, T., Zhang, Y., Fenley, M.O., Li, H.
Molecular Basis of Box C/D RNA-Protein Interactions; Cocrystal Structure of Archaeal L7Ae and a Box C/D RNA.
STRUCTURE , 12, pp. 807 - 818, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 120.584b = 120.584c = 120.584(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:EVAPORATION
Drop:PEG 400 magnesium acetate, HEPES, H2O
Reservoir:PEG 400 magnesium acetate, H2O
Refinement:The structure was refined using the CNS 1.1 program. The R value is 23.5 for 28953 reflections in the resolution range 29.25 to 2.7 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Units
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1RLG

PubMed: 15130473




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