NDB ID: PR0124


Title:CRYSTAL STRUCTURE OF TRNA NUCLEOTIDYLTRANSFERASE COMPLEXED WITH A PRIMER TRNA AND AN INCOMING ATP ANALOG
Molecular Description:poly A polymerase/RNA (75-MER)
Structural Features:SINGLE STRAND, HAIRPIN LOOP, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC,D:G G C C A G G U A G C U C A G U U G G U A G A G C A C U G G A C U G A A A A U C C A G G U G U C G G C G G U U C G A U U C C G C C C C U G G C C A C C
Protein Sequence:
ChainsA,B: Click here for sequence.
Primary Citation:Tomita, K., Fukai, S., Ishitani, R., Ueda, T., Takeuchi, N., Vassylyev, D.G., Nureki, O.
Structural basis for template-independent RNA polymerization.
Nature , 430, pp. 700 - 704, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 109.476b = 125.900c = 58.920(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 23.0 for 39038 reflections in the resolution range 40.0 to 2.8 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1VFG

PubMed: 15295603




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