NDB ID: PR0134


Title:FOOT AND MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA
Molecular Description:
RNA-dependent RNA polymerase(E.C.2.7.7.48)/5'-R(
CpApUpGpGpGpCpC)-3'/5'-R(GpGpCpCpC)-3'
Structural Features:RH DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainB:C A U G G G C C
ChainC:G G C C C
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.
Structure of Foot-and-Mouth Disease Virus RNA-dependent RNA Polymerase and Its Complex with a Template-Primer RNA
J.Biol.Chem. , 279, pp. 47212 - 47221, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 32   1
Cell Constants:
a = 94.627b = 94.627c = 100.513(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 27.3 for 10479 reflections in the resolution range 19.52 to 3.00 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1WNE

PubMed: 15294895




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey